The detailed information of tRNA gene sequence


Sequence ID>W1510014470
Genome IDBBPY01000006
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema endosymbiont of Eucomonympha sp. of Eucomonympha sp. E12 [BBPY]
Start position on genome 1514
End posion on genome 1587
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcttgctatc
tRNA gene sequence 
GGGCCTATAGCTCAGTCGGTTAGAGCTGCGGACTCATAATCCGTAGGTCCCAGGTTCAAG
TCCTGGTGGGCCCAgcc
Downstream region at tRNA end position 
ttacggacgg
Secondary structure (Cloverleaf model)
>W1510014470	Met	CAT
                   c      Agcc ttacggacgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G T C C     A
      T G A        A      | | | | |     A
    C       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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