The detailed information of tRNA gene sequence


Sequence ID>W1510020454
Genome IDBBXY01000021
Search identical group
Phylum/ClassChloroflexota
SpeciesLongilinea arvoryzae KOME-1 [BBXY]
Start position on genome 234454
End posion on genome 234359
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcttaatgtt
tRNA gene sequence 
GGGAGTGGCTGAGTTCCGGTGGGCTCCCCGGTCTTCAAAACCGGTGGTGGGTCGCGTTGC
GGGCCGCGGTGGGTTCGACTCCCATCCATTCCCGCCt
Downstream region at tRNA end position 
gtgagtgtcg
Secondary structure (Cloverleaf model)
>W1510020454	SeC	TCA
                   t      GCCt gtgagtgtcg
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G - C          T C
                    C     T A C C C     A
      C C T        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | |                 T T
    T       G C T C
      G G          C     TGGTGGGTCGCGTTGCGGGCCGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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