The detailed information of tRNA gene sequence


Sequence ID>C213003288
Genome IDCP066339
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus sp. SO9 [CP066339]
Start position on genome 3373023
End posion on genome 3373119
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cacacttcga
tRNA gene sequence 
GGGGGTGGATGGGGAACTGGTGTCCTCCCTGGCCTTCAAAGCCATGTGTGCGGTGTGGTG
CATCGCAGGTGAGTTCGATTCTCACACACTCCCGCCA
Downstream region at tRNA end position 
gaaaccgaac
Secondary structure (Cloverleaf model)
>C213003288	SeC	TCA
                   a      GCCA gaaaccgaac
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G   A          T T
                    A     C A C T C     A
      C A A        T      | | | | |     G
    T       G G G G       G T G A G     C
    G       | | + |                 T T
    G       C C T C
      T G T        C     GTGTGCGGTGTGGTGCATCGCAG
                    C   T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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