The detailed information of tRNA gene sequence


Sequence ID>C231024779
Genome IDAP026068
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Hamiltonella defensa (Ceratovacuna japonica) [AP026068]
Start position on genome 890448
End posion on genome 890524
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ccgcaaattt
tRNA gene sequence 
CGGCATGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGGCGGGGGTCGGAGGTTCAAA
TCCTCTCATGCCGACCA
Downstream region at tRNA end position 
gaatagtcca
Secondary structure (Cloverleaf model)
>C231024779	Pro	GGG
                   t      ACCA gaatagtcca
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.-

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