The detailed information of tRNA gene sequence


Sequence ID>C231024781
Genome IDAP026068
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Hamiltonella defensa (Ceratovacuna japonica) [AP026068]
Start position on genome 1140636
End posion on genome 1140728
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acaaaatgct
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATATAGTTAAAAGCT
GTATCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
gtttatttag
Secondary structure (Cloverleaf model)
>C231024781	Ser	GCT
                   t      GCCA gtttatttag
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATATAGTTAAAAGCTGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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