The detailed information of tRNA gene sequence


Sequence ID>C231130506
Genome IDCP073159
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorrelia parkeri SLO [CP073159]
Start position on genome 648149
End posion on genome 648076
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tattgcaaga
tRNA gene sequence 
CGCAGGGTGGAGCAGTTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCGAG
TCCTGCCCCTGCTAttt
Downstream region at tRNA end position 
aaagatgcga
Secondary structure (Cloverleaf model)
>C231130506	fMet	CAT
                   a      Attt aaagatgcga
                     C   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | + | | |     G
    T       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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