The detailed information of tRNA gene sequence


Sequence ID>C231161319
Genome IDCP078091
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPorphyrobacter sp. ULC335 [CP078091]
Start position on genome 3475972
End posion on genome 3475896
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aaattggtat
tRNA gene sequence 
CGCGGGATGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTTGGTTCAAA
TCCAACTCCCGCAACCA
Downstream region at tRNA end position 
ccgtaaaaac
Secondary structure (Cloverleaf model)
>C231161319	fMet	CAT
                   t      ACCA ccgtaaaaac
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A A C C     A
      C G A        G      | | | | |     A
    C       C G A G       G T T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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