The detailed information of tRNA gene sequence


Sequence ID>C231201349
Genome IDCP084930
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas morindae NBD5 [CP084930, CP084931]
Start position on genome 875404
End posion on genome 875328
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caagaaatgc
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
ctctccacgg
Secondary structure (Cloverleaf model)
>C231201349	Asp	GTC
                   c      GCCA ctctccacgg
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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