The detailed information of tRNA gene sequence


Sequence ID>C231284452
Genome IDCP090820
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Nanosynbacter sp. HMT-348_TM7c-JB [CP090820]
Start position on genome 31531
End posion on genome 31623
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tactaaatct
tRNA gene sequence 
GGAGGAGTACCCAAGTGGCTGAAGGGGACGGTTTGCTAAATCGTTAGTACGGGGAGACCT
GTAGCGGGAGTTCGAATCTCCCCTCCTCCGCCA
Downstream region at tRNA end position 
gaactaaagc
Secondary structure (Cloverleaf model)
>C231284452	Ser	GCT
                   t      GCCA gaactaaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     G
    G       A C C C       G G G A G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGTACGGGGAGACCTGTAGC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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