The detailed information of tRNA gene sequence


Sequence ID>C231308875
Genome IDCP091912
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesThalassospiraceae bacterium SW-3-3 [CP091912]
Start position on genome 1700316
End posion on genome 1700392
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acatccgcgt
tRNA gene sequence 
CGGGGAGTAGCGCAGTCTGGTAGCGTACCTGCTTTGGGAGCAGGGGGTCGCGAGTTCGAA
TCTCGCCTTCCCGACCA
Downstream region at tRNA end position 
tttttccctt
Secondary structure (Cloverleaf model)
>C231308875	Pro	TGG
                   t      ACCA tttttccctt
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C          T A
                    T     C G C T C     A
      T G A        A      | | | | |     G
    C       C G C G       G C G A G     C
    T       | | | +                 T T
    G       G C G T
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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