The detailed information of tRNA gene sequence


Sequence ID>C231322424
Genome IDCP092712
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAliivibrio fischeri ATCC 7744 = JCM 18803 = DSM 507 [CP092712, CP092713]
Start position on genome 2904876
End posion on genome 2904800
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
gatagggtat
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGCGTTGGCCTCCGGAGCCAAAGGTCGAAGGTTCGAA
TCCTTTCGGGCGTGCCA
Downstream region at tRNA end position 
tccggaatat
Secondary structure (Cloverleaf model)
>C231322424	Arg	CCG
                   t      GCCA tccggaatat
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.-

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