The detailed information of tRNA gene sequence


Sequence ID>C231500687
Genome IDCP104917
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAvibacterium paragallinarum AP-2 [CP104917]
Start position on genome 109337
End posion on genome 109426
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attcttagat
tRNA gene sequence 
GGTGAGATGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTATGTGCGAAAGTGCA
TCGGGGGTTCGAATCCCCCTCTCACCGCCA
Downstream region at tRNA end position 
cggtgctttg
Secondary structure (Cloverleaf model)
>C231500687	Ser	GGA
                   t      GCCA cggtgctttg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATGTGCGAAAGTGCATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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