The detailed information of tRNA gene sequence


Sequence ID>C231534338
Genome IDCP110535
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalomonas sp. BDJS001 [CP110535]
Start position on genome 1403036
End posion on genome 1403123
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccaaaacgc
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTAAGCCGCAAGGCTTC
GAGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
caaaattttg
Secondary structure (Cloverleaf model)
>C231534338	Ser	GGA
                   c      GCCA caaaattttg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TAAGCCGCAAGGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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