The detailed information of tRNA gene sequence


Sequence ID>C231554594
Genome IDCP114006
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Phytoplasma rubi RS [CP114006]
Start position on genome 624140
End posion on genome 624052
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agaaaaagtt
tRNA gene sequence 
GGAGAAATACCCAAGCGGTTTAAGGGGCCAGTCTTGAAAACTGGAAGATCTGAAAGGATG
CGGGGGTTCGAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
aagtttgtta
Secondary structure (Cloverleaf model)
>C231554594	Ser	TGA
                   t      GCCA aagtttgtta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    G       A C C C       G G G G G     C
    G         | | |                 T T
    T       A G G G
      T T A        G     AAGATCTGAAAGGATGC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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