The detailed information of tRNA gene sequence


Sequence ID>C231564839
Genome IDCP115156
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Phytoplasma sacchari SCWL1 [CP115156]
Start position on genome 538279
End posion on genome 538201
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
tataaacaat
tRNA gene sequence 
GGACCTGTAGCTCAGTCTGGTCCAGAGCTACCGGCTCATAACCGGTTGGTCGTAGGTTCA
AATCCTACCAGGTCCACCA
Downstream region at tRNA end position 
tttattttat
Secondary structure (Cloverleaf model)
>C231564839	Ile2	CAT
                   t      ACCA tttattttat
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C A T C C     A
    C T G A        A      | | | | |     A
  T         C T C G       G T A G G     C
  G         | | | |                 T T
  G         G A G C
    T C C A        T     TGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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