The detailed information of tRNA gene sequence


Sequence ID>C231573122
Genome IDCP116038
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Phytoplasma oryzae HN2022 [CP116038]
Start position on genome 292820
End posion on genome 292733
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atatatagga
tRNA gene sequence 
GGAGGGATACTCAAACGGTTAAGAGGCATGTTTGGAAAATATGTAGATCTGAAAAGATGT
GAGGGTTCGAATCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
ttttattttt
Secondary structure (Cloverleaf model)
>C231573122	Ser	GGA
                   a      GCCA ttttattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     A - T          T A
                    T     C T C C C     A
      C A A        A      | | | | |     G
    G       A C T C       G A G G G     C
    G         | | |                 T T
    T       A G A G
      T A          G     TAGATCTGAAAAGATGT
                    C - G
                    A - T
                    T - A
                    G + T
                    T - A
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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