The detailed information of tRNA gene sequence


Sequence ID>C231573125
Genome IDCP116038
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Phytoplasma oryzae HN2022 [CP116038]
Start position on genome 115394
End posion on genome 115302
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attttattaa
tRNA gene sequence 
GGAGTAGTACTCAAGTGGTTATAAGAGGCGTCCCTGCTAAAGACGTAGTCCGATCAAATC
GGTGCAAGGGTTCAAATCCCTTCTACTCCGCCA
Downstream region at tRNA end position 
aaagaataaa
Secondary structure (Cloverleaf model)
>C231573125	Ser	GCT
                   a      GCCA aaagaataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     T T C C C     A
    G T G A        A      | | | | |     A
  G         A C T C       A A G G G     C
  T           | | |                 T T
  T         A G A G
    A T A          G     TAGTCCGATCAAATCGGTGC
                    C - G
                    G - C
                    T - A
                    C - G
                    C   A
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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