The detailed information of tRNA gene sequence


Sequence ID>C231577400
Genome IDCP116430
Search identical group
Phylum/ClassBacillota
SpeciesClostridium perfringens D NCTC8346 [CP116430]
Start position on genome 1216843
End posion on genome 1216934
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcctgcacat
tRNA gene sequence 
GGAAAGTTACTCAAGTTGGTTAAGAGGGCAGATTGCTAATCTGTTAGTAGGCTTAAAGTC
TAGAAAGAGTTCAAATCTCTTACTTTCCGCCA
Downstream region at tRNA end position 
attaaaattt
Secondary structure (Cloverleaf model)
>C231577400	Ser	GCT
                   t      GCCA attaaaattt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     T - A          T A
                    T     T T C T C     A
      T G A        A      | | | | |     A
    T       A C T C       A A G A G     C
    G         | | |                 T T
    G       A G A G
      T T A        G     TAGTAGGCTTAAAGTCTAGA
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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