The detailed information of tRNA gene sequence


Sequence ID>C231595868
Genome IDCP117411
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas naphthae KACC 18716 [CP117411]
Start position on genome 2283208
End posion on genome 2283297
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgccgcagcc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAACGCTTTGCTAAAGCGTCGTACGGGAGACCGTA
CCGAGAGTTCGAATCTCTCCGTCTCCGCCA
Downstream region at tRNA end position 
tcaagtcgtt
Secondary structure (Cloverleaf model)
>C231595868	Ser	GCT
                   c      GCCA tcaagtcgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGAGACCGTACC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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