The detailed information of tRNA gene sequence


Sequence ID>C10100001
Genome IDCP001727
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 [CP001727]
Start position on genome 23019
End posion on genome 23097
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tttcgcgcgt
tRNA gene sequence 
GCACCCGTAGCTCAGTAGGATAGAGCGGTGGTTTCCTAAACCGCGTCTTGCGCAGGTTCG
AGTCCTGCCGGGTGCGCCA
Downstream region at tRNA end position 
gaaagtcagt
Secondary structure (Cloverleaf model)
>C10100001	Arg	CCT
                   t      GCCA gaaagtcagt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    A       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     GTCTTGC
                    G - C
                    T + G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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