The detailed information of tRNA gene sequence


Sequence ID>C10100002
Genome IDCP001727
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 [CP001727]
Start position on genome 111113
End posion on genome 111188
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaggaacct
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCGAGT
CCTGCCCCCGCAACCA
Downstream region at tRNA end position 
gatggagccg
Secondary structure (Cloverleaf model)
>C10100002	Met	CAT
                   t      ACCA gatggagccg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | | | | |     G
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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