The detailed information of tRNA gene sequence


Sequence ID>C10100003
Genome IDCP001727
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 [CP001727]
Start position on genome 111192
End posion on genome 111268
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcaaccagat
tRNA gene sequence 
GGAGCCGTGGTGTAGAGGCCTAACATGCCTGCCTGTCACGCAGGAGATCGCGGGTTCGAA
TCCCGTCGGCTCCGCCA
Downstream region at tRNA end position 
aaaaggaccg
Secondary structure (Cloverleaf model)
>C10100003	Asp	GTC
                   t      GCCA aaaaggaccg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
      A G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    C       A C A T
      C T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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