The detailed information of tRNA gene sequence


Sequence ID>C10100004
Genome IDCP001727
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 [CP001727]
Start position on genome 122528
End posion on genome 122617
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agaccatcgc
tRNA gene sequence 
GGAGAGATGTCTGAGTGGTCGAAAGAGCCCGCCTCGAAAGCGGGTAGGTCCGCAAGGGCC
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
gaaagatcgg
Secondary structure (Cloverleaf model)
>C10100004	Ser	CGA
                   c      GCCA gaaagatcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G T G G G     C
    G         | | |                 T T
    T       A A G A
      C G A        G     TAGGTCCGCAAGGGCCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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