The detailed information of tRNA gene sequence


Sequence ID>C10100005
Genome IDCP001727
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 [CP001727]
Start position on genome 603605
End posion on genome 603677
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cctttgtcat
tRNA gene sequence 
GCCCGCGTAGCTCAACAGGCAGAGCAGCCGCCTTGTAAGCGGCCTGTTGCAGGTTCGAGT
CCTGTCGCGGGCTtag
Downstream region at tRNA end position 
gtctatggac
Secondary structure (Cloverleaf model)
>C10100005	Thr	TGT
                   t      Ttag gtctatggac
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
      C A A        A      + | | | |     G
    A       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     CTGTT
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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