The detailed information of tRNA gene sequence


Sequence ID>C10100009
Genome IDCP001727
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 [CP001727]
Start position on genome 1130289
End posion on genome 1130371
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ccatgtgatt
tRNA gene sequence 
CCCGGAGTGGCGGAATTGGCAGACGCACACGACTCAAAATCGTGCGGGAAACCGTGCCGG
TTCGAGTCCGGCCTCCGGGACCA
Downstream region at tRNA end position 
acgcttgacg
Secondary structure (Cloverleaf model)
>C10100009	Leu	CAA
                   t      ACCA acgcttgacg
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGGGAAACCGT
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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