The detailed information of tRNA gene sequence


Sequence ID>C10100010
Genome IDCP001727
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 [CP001727]
Start position on genome 1130394
End posion on genome 1130469
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gagaccatgt
tRNA gene sequence 
GGGGCTATAGCTCAGTTGGGAGAGCGCCAGAATCGCACTCTGGAGGCCAGCGGTTCGAAT
CCGCTTAGCTCCACCA
Downstream region at tRNA end position 
cattcctcga
Secondary structure (Cloverleaf model)
>C10100010	Ala	CGC
                   t      ACCA cattcctcga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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