The detailed information of tRNA gene sequence


Sequence ID>C10100012
Genome IDCP001727
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 [CP001727]
Start position on genome 1130603
End posion on genome 1130677
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cggtcgagat
tRNA gene sequence 
GGGCGGTTAGCTCAGCGGGAGAGCACTCGCCTCACACGCGAGGGGTCGGCAGTTCGATCC
TGCCACCGCCCACCA
Downstream region at tRNA end position 
tttttatggg
Secondary structure (Cloverleaf model)
>C10100012	Val	CAC
                   t      ACCA tttttatggg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     C C G T C     A
        G A        A      | | | | |     G
      C     C T C G       G G C A G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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