The detailed information of tRNA gene sequence


Sequence ID>C10100015
Genome IDCP001727
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 [CP001727]
Start position on genome 1279264
End posion on genome 1279340
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgcaatccgt
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTCAGAGCACACGGTTCATACCCGTGCTGTCGGGGGTTCGAA
TCCCTCCGCCGCTACCA
Downstream region at tRNA end position 
cgcgccacct
Secondary structure (Cloverleaf model)
>C10100015	Met	CAT
                   t      ACCA cgcgccacct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     CTGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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