The detailed information of tRNA gene sequence


Sequence ID>C10100018
Genome IDCP001727
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 [CP001727]
Start position on genome 1547687
End posion on genome 1547762
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggttccacgc
tRNA gene sequence 
AGGGGCGTAGTTCAGCTGGTAGAACGGCGGTCTCCAAAACCGCATGTCGTGGGTTCGAAT
CCTGCCGCCCCTGCCA
Downstream region at tRNA end position 
ttctcccctc
Secondary structure (Cloverleaf model)
>C10100018	Trp	CCA
                   c      GCCA ttctcccctc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | + + | |     G
    T       C T T G       G T G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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