The detailed information of tRNA gene sequence


Sequence ID>C10100019
Genome IDCP001727
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 [CP001727]
Start position on genome 1547783
End posion on genome 1547858
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
catttccctt
tRNA gene sequence 
GCTCCCATAGCTCAGTTGGTAGAGCGCATCCATGGTAAGGATGAGGTCACCAGTTCAAGC
CTGGTTGGGAGCTCCA
Downstream region at tRNA end position 
gagggcgttt
Secondary structure (Cloverleaf model)
>C10100019	Thr	GGT
                   t      TCCA gagggcgttt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          C G
                    T     T G G T C     A
      T G A        A      | | | | |     A
    T       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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