The detailed information of tRNA gene sequence


Sequence ID>C10100040
Genome IDCP001727
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 [CP001727]
Start position on genome 1917023
End posion on genome 1916948
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gcagccagtc
tRNA gene sequence 
GGCCCTATCGTCTAATGGCTCAGGACGCCGCCCTCTCACGGCGGTAATAGGGGTTCGAAT
CCCCTTAGGGTCACCA
Downstream region at tRNA end position 
cgggtcatta
Secondary structure (Cloverleaf model)
>C10100040	Glu	CTC
                   c      ACCA cgggtcatta
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     T C C C C     A
      T A A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      T C A        G     TAAT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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