The detailed information of tRNA gene sequence


Sequence ID>C10100050
Genome IDCP001727
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 [CP001727]
Start position on genome 294943
End posion on genome 294867
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
cactatacgc
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGCGTTTGACTACGAATCAAAAGGTCGGGAGTTCGAA
TCTCTCCGGGCGCGCCA
Downstream region at tRNA end position 
tttcatccgg
Secondary structure (Cloverleaf model)
>C10100050	Arg	ACG
                   c      GCCA tttcatccgg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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