The detailed information of tRNA gene sequence


Sequence ID>C10100059
Genome IDCP001727
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 [CP001727]
Start position on genome 294160
End posion on genome 294085
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
caccacgcga
tRNA gene sequence 
GGCCCTATCGTCTAATGGTTTAGGACGCCGCCCTCTCACGGCGGAAATCGGGGTTCGAAT
CCCCGTAGGGTCACCA
Downstream region at tRNA end position 
catggagtga
Secondary structure (Cloverleaf model)
>C10100059	Glu	CTC
                   a      ACCA catggagtga
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     G C C C C     A
      T A A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      T T A        G     AAAT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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