The detailed information of tRNA gene sequence


Sequence ID>C10100060
Genome IDCP001727
Search identical group
Phylum/ClassBacillota
SpeciesAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 [CP001727]
Start position on genome 294081
End posion on genome 293986
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtcaccacat
tRNA gene sequence 
GGAGTGATGGCCGAGTTGGTCGAAGGCGCTCGCCTGCTAAGCGAGTATACGGTTGTTAAG
ACCGTATCGAGGGTTCGAATCCCTCTCACTCCGCCA
Downstream region at tRNA end position 
cactggaact
Secondary structure (Cloverleaf model)
>C10100060	Ser	GCT
                   t      GCCA cactggaact
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TATACGGTTGTTAAGACCGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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