The detailed information of tRNA gene sequence


Sequence ID>C10100120
Genome IDCP002105
Search identical group
Phylum/ClassBacillota
SpeciesAcetohalobium arabaticum DSM 5501 [CP002105]
Start position on genome 32080
End posion on genome 32175
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tctatgcgtt
tRNA gene sequence 
GGAGAAGTACCCAAGTCAGGTTGAAGGGGACGGTTTGCTAAATCGTTAGGTCGCCATATA
GGCGGCGCGAGGGTTCAAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
taattaatga
Secondary structure (Cloverleaf model)
>C10100120	Ser	GCT
                   t      GCCA taattaatga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
    C T G A        A      | | | | |     A
  A         A C C C       G A G G G     C
  G           | | |                 T T
  G         A G G G
    T T G A        G     TAGGTCGCCATATAGGCGGCGC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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