The detailed information of tRNA gene sequence


Sequence ID>C10100364
Genome IDCP001785
Search identical group
Phylum/ClassBacillota
SpeciesAmmonifex degensii KC4 [CP001785]
Start position on genome 2047204
End posion on genome 2047300
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgagaagagc
tRNA gene sequence 
GGGAGTGGACGGATCCTGGTGGATCTCCTGGCCTTCAAAGCCAGCTGGCGGGCAGGAAAA
AGTCCGCGGTAGGTTCGATTCCTACCCACTCCCGCCA
Downstream region at tRNA end position 
aggtgtactc
Secondary structure (Cloverleaf model)
>C10100364	SeC	TCA
                   c      GCCA aggtgtactc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T T
                    A     C A T C C     A
      T C C        C      | | | | |     G
    G       T A G G       G T A G G     C
    G       | | | +                 T T
    T       A T C T
      G G          C     CTGGCGGGCAGGAAAAAGTCCGCG
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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