The detailed information of tRNA gene sequence


Sequence ID>C10100366
Genome IDCP001785
Search identical group
Phylum/ClassBacillota
SpeciesAmmonifex degensii KC4 [CP001785]
Start position on genome 2115621
End posion on genome 2115525
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attgacacca
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCGGTCGCCTGCTAAGCGGCTGTAGAGGGCTAAAAA
CCCTCTACCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
tacgcgcccg
Secondary structure (Cloverleaf model)
>C10100366	Ser	GCT
                   a      GCCA tacgcgcccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTAGAGGGCTAAAAACCCTCTACC
                    G - C
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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