The detailed information of tRNA gene sequence


Sequence ID>C10100369
Genome IDCP001785
Search identical group
Phylum/ClassBacillota
SpeciesAmmonifex degensii KC4 [CP001785]
Start position on genome 2114859
End posion on genome 2114767
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgcatggagc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGACTAAGGCGCTCGACTCGAAATCGAGTAGGCGGGCAAAACCC
GCCTCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tgaaaatatc
Secondary structure (Cloverleaf model)
>C10100369	Ser	CGA
                   c      GCCA tgaaaatatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    A       A G G C
      C T A        G     TAGGCGGGCAAAACCCGCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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