The detailed information of tRNA gene sequence


Sequence ID>W2130044223
Genome IDSRZO01000461
Search identical group
Phylum/ClassSpirochaetota
SpeciesBrachyspira hampsonii T104 [SRZO]
Start position on genome 3864
End posion on genome 3791
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttttatttc
tRNA gene sequence 
GGCGGCGTGGCTCAGGTGGTTAGAGCATGCGGCTCATATCCGCAGTGTCAGGGGTTCAAG
TCCCTTCGCCGCTAata
Downstream region at tRNA end position 
attttataaa
Secondary structure (Cloverleaf model)
>W2130044223	Met	CAT
                   c      Aata attttataaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      G G A        G      | + | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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