The detailed information of tRNA gene sequence


Sequence ID>C10101159
Genome IDCP001708
Search identical group
Phylum/ClassBacillota
SpeciesAnaerococcus prevotii DSM 20548 [CP001708]
Start position on genome 242663
End posion on genome 242752
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttaaatatat
tRNA gene sequence 
GGAGAGGTACCGAAGCGGTCATAACGGGGCGGTCTTGAAAACCGTTAGAGTCTTTGGCTC
ACAAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
atatcgcttt
Secondary structure (Cloverleaf model)
>C10101159	Ser	TGA
                   t      GCCA atatcgcttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       A A G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TAGAGTCTTTGGCTCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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