The detailed information of tRNA gene sequence


Sequence ID>C245074261
Genome IDCP049885
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesAcidovorax sp. HDW3 [CP049885]
Start position on genome 474205
End posion on genome 474532
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tggtatgaat
tRNA gene sequence 
GGGCCGTTAGCTCAGTTGGTTAGAGCAGAGGACTTTGAATCCTTTGGTCGCTGGTTCGAG
CCCAGCACGGCCTACCA
Downstream region at tRNA end position 
ttcatccacc
Secondary structure (Cloverleaf model)
>C245074261	Gln	TTG
                   t      ACCA ttcatccacc
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          C G
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T*      A
                    T T G
intron: position=34, length=251 (in A-loop)
CATCAAAAATGGTGACCATGGGGCGAGAGCCCCATTGGAAAACCGGGTGAATTCAAGGAACCCTACAGCG
CAAGCCATGGCAACCTTGAGCCAAGCCCGCCGAAAGGCAGGTCGCAAGACCGGTAGGCGGGAAGGTGCAG
AGACTAGGACGTGAGGAGCCCATCCGATAAGCGTCCCGTGAGCGCCCGGCGCCCCAACAGTTCGGCTGTG
GGCGGTGAGATAGTCCAAGGAGTGGGGAAACCCACGCAAAC
Intron
Comment/Decision
Genome/Seq. Info.-

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