The detailed information of tRNA gene sequence


Sequence ID>C10102061
Genome IDCP001878
Search identical group
Phylum/ClassBacillota
SpeciesAlkalihalophilus pseudofirmus OF4 [CP001878]
Start position on genome 1828413
End posion on genome 1828503
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtggagccac
tRNA gene sequence 
GGAGAAGTACCCAAGTGGCTGAAGGGGCGCCCCTGCTAAGGGTGTAGGTCGCGCGAGCGG
CGCGAGGGTTCAAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
gtatcttttc
Secondary structure (Cloverleaf model)
>C10102061	Ser	GCT
                   c      GCCA gtatcttttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGGTCGCGCGAGCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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