The detailed information of tRNA gene sequence


Sequence ID>C10102082
Genome IDCP001878
Search identical group
Phylum/ClassBacillota
SpeciesAlkalihalophilus pseudofirmus OF4 [CP001878]
Start position on genome 2194961
End posion on genome 2195034
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccatcttcat
tRNA gene sequence 
AGGGGCATAGTTTAAAGGTAGAACAGAGGTCTCCAAAACCTCCGGTGTGGGTTCAATTCC
TACTGCCCCTGCCA
Downstream region at tRNA end position 
atatattatt
Secondary structure (Cloverleaf model)
>C10102082	Trp	CCA
                   t      GCCA atatattatt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T T
                    T     C A T C C     A
        A A        A      | | + | |     A
      A     T T T G       G T G G G     C
      G     + | | |                 T T
      G     G A A C
        T A        A     CGGT
                    G - C
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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