The detailed information of tRNA gene sequence


Sequence ID>C245228043
Genome IDCP133777
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesActimicrobium sp. CCC2.4 [CP133777]
Start position on genome 3761550
End posion on genome 3761848
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
cgagtccact
tRNA gene sequence 
GCCCCCGTAGCTCAGTGGATAGAGCGATCCCCTCCTAAGGGATAGGTCACACGTTCGATC
CGTGTCGGGGGCACCA
Downstream region at tRNA end position 
ccaactactt
Secondary structure (Cloverleaf model)
>C245228043	Arg	CCT
                   t      ACCA ccaactactt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          C T
                    T     T G T G C     A
      T G A        A      | | | | |     G
    G       C T C G       A C A C G     C
    G       | | | |                 T T
    A       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T *
intron: position=37, length=223 (in A-loop)
ATTGATTTGGGCATCGGACTCCGAAAGGGTCCGCATGAATGGAGTCAAATTCGGTGAACCCTGACAGGTC
ATGCTGTTGGCAACGCCGAGCCAAGCCCGATTCCAATCGGGAAGGTGTAGAGACTAGACGGCTCCCTCCT
GTAGCGCCGCAGCACAGCGCCATGGAGAAGGCATAGTCCAGACTGCAAACGGCAAAGCCGGTGGCGAAAG
CCATAGCGGGATG
Intron
Comment/Decision
Genome/Seq. Info.-

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