The detailed information of tRNA gene sequence


Sequence ID>C10103628
Genome IDCP002164
Search identical group
Phylum/ClassBacillota
SpeciesCaldicellulosiruptor obsidiansis OB47 [CP002164]
Start position on genome 802288
End posion on genome 802364
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
catctaaaaa
tRNA gene sequence 
GGCCCAGTAGCTCAGTCGGTTAGAGCGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCTGGGTCGCCA
Downstream region at tRNA end position 
tctaaaaata
Secondary structure (Cloverleaf model)
>C10103628	Asp	GTC
                   a      GCCA tctaaaaata
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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