The detailed information of tRNA gene sequence


Sequence ID>C10103642
Genome IDCP002164
Search identical group
Phylum/ClassBacillota
SpeciesCaldicellulosiruptor obsidiansis OB47 [CP002164]
Start position on genome 1155227
End posion on genome 1155302
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caccagatat
tRNA gene sequence 
CGCGGGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGAGGTTCAAAT
CCTCCCCCCGCAACCA
Downstream region at tRNA end position 
aaaaattagt
Secondary structure (Cloverleaf model)
>C10103642	Met	CAT
                   t      ACCA aaaaattagt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
      C G A        G      | | | | |     A
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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