The detailed information of tRNA gene sequence


Sequence ID>C10103662
Genome IDCP002164
Search identical group
Phylum/ClassBacillota
SpeciesCaldicellulosiruptor obsidiansis OB47 [CP002164]
Start position on genome 1913532
End posion on genome 1913457
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attttattaa
tRNA gene sequence 
GGGCCTTTAGCTCAGCTGGTAGAGCGGCCGGCTCATAACCGGTTGGTCTGGGGTTCGAAT
CCCTAAGGGCCCACCA
Downstream region at tRNA end position 
attttaaaaa
Secondary structure (Cloverleaf model)
>C10103662	Met	CAT
                   a      ACCA attttaaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A          T A
                    T     A T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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