The detailed information of tRNA gene sequence


Sequence ID>C10103713
Genome IDCP001699
Search identical group
Phylum/ClassBacteroidota
SpeciesChitinophaga pinensis DSM 2588 [CP001699]
Start position on genome 298566
End posion on genome 298655
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caacctactc
tRNA gene sequence 
GGAGAAGTGCAGGAGTGGTTGAACTGGCACGCCTGGAAAGTGTGTAAACTCGAAAGGGTT
TCAAGGGTTCGAATCCCTTCTTCTCCGCAA
Downstream region at tRNA end position 
gctttaagcc
Secondary structure (Cloverleaf model)
>C10103713	Ser	GGA
                   c      GCAA gctttaagcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G G A C       A A G G G     C
    G         | | |                 T T
    T       A C T G
      T G A        G     TAAACTCGAAAGGGTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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