The detailed information of tRNA gene sequence


Sequence ID>C10104707
Genome IDCP001701
Search identical group
Phylum/ClassCyanobacteriota
SpeciesRippkaea orientalis [CP001701]
Start position on genome 2247671
End posion on genome 2247744
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggaaaggcga
tRNA gene sequence 
CGCGGGATAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGTGGTTCAAA
TCCGCCTCCCGCCAtta
Downstream region at tRNA end position 
agttaactaa
Secondary structure (Cloverleaf model)
>C10104707	Met	CAT
                   a      Atta agttaactaa
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C G C C     A
      T G A        A      | | + | |     A
    C       C G A G       G G T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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