The detailed information of tRNA gene sequence


Sequence ID>C10104742
Genome IDCP001701
Search identical group
Phylum/ClassCyanobacteriota
SpeciesRippkaea orientalis [CP001701]
Start position on genome 338591
End posion on genome 338515
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gcaatgttgT
tRNA gene sequence 
GGGGAATTAGCTCAGTTGGTAGAGTGCTGCGATCGCACCGCAGAGGTCAGGGGTTCAAAT
CCCCTATTCTCCATCA
Downstream region at tRNA end position 
tagtatgact
Secondary structure (Cloverleaf model)
>C10104742	Ala	CGC
                   T      ATCA tagtatgact
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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